Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808542.1_cds_XP_016495392.1_9712
CDS Infomation

[gene=LOC107814476] [db_xref=GeneID:107814476] [protein=serine/threonine-protein kinase Nek6-like] [protein_id=XP_016495392.1] [location=join(4963..5087,5805..5871,7995..8060,8421..8467,8557..8602,8764..8844,8998..9040,9129..9178,9900..9981,10160..10209,10297..10370,10463..10514,10612..11517)] [gbkey=CDS]
Sequence

ATGGAGGTGAGAAATAATAATGAAGTTGAATATTCAAAGATGGAAGATTATGAAGTGATA
GAACAAATTGGTAGAGGAGCTTTTGGAGCTGCATTTCTTGTTCATCACAAGTTTGAGAAA
AGAAAGTATGTAATGAAGAAGATCCGCTTGGCTAAACAGACAGAAAAGTTCAAGCGCACT
GCTCATCAAGAGATGAATTTGATAGCCAAGCTTGATAACCCTTACATTGTAGAATACAAG
GATGCATGGGTAGAGAAGGACTCTTTTGTCTGCATTGTGACAAGTTACTGTGAAGGTGGA
GACATGACTGAAATTATTAGAAAAGCCAGAGGAACCATTTTCCCTGAAGAGAAACTTTGC
AAATGGTTGACTCAGTTGTTGCTGGCTCTTGATTACCTTCACTCCAATCGTGTTCTTCAC
AGAGATCTCAAATGCTCTAACATTTTCCTTACCAAAGACGATGAAATCAGACTTGGTGAT
TTTGGATTAGCCAAATTGCTGAATAAAGATGATCTTGCCTCGTCGATTGTGGGAACTCCA
ACATATATGTGCCCTGAGCTTCTAGCAGATATACCCTATGGATACAAATCAGACATATGG
TCTCTAGGTTGTTGTATGTTTGAAATTGCTGCACATATGCCTGCATTTCGAGCTCCAGAT
ATGACTGGACTGATCAACAAAATAAACAGATCAACAGTCTCTCCACTTCCAACCATGTAT
TCCTCCACATTGAAACGATTGATCAAAAGTATGCTAAGAAAAAGCCCCGAGCACAGACCT
ACGGCTGCAGAGTTGTTGAGGCATCCACATTTACAACCATACCTTGCTAAATGCCGGAAC
TTGCCACCAGCATTTGTATCAGTAGTTTCTGACAAAGAAGCAAAACATACTAATGAGTCA
ATTTCCAAGCCTACATTAAGAAAAGATCAAAGGCTTCCGAAGGAAATTAGACAAGCCAAA
AAACAAGACAAGATTGTTGCAGTTGAAGAACTTCATGAACTCAAAGGCGAAGCGCCTAAC
ACGTGTAAAATCAAGAAAATTAACCTTCAGAGCAAGAAAGTAGAAAATCCGGAGAATGAA
AGACGCCAAAGCATATCCGTCAAAAAAAGTGGAAGTACTAATTCAAGAAGCTCCACAAGA
AGTACTTTGACTGATCAACATGAAGGTGATACGAAAGAATTCGTAGCTGAGGTTTATAAC
ACAACTGAGGGAAATGCAGGAACAGATCAAGAAAAGCATAAACCGACTGATCATAGGCCT
ATCGAGGGCAAGAAAGATGCAAAATCTCAACCAGAAGAGCAAAATAAATGCACATTGAAG
AAACCAGGAATACCAAAACCATATAATGAAGTTGCAGCAAAAGCCATTGATCATCTAAGT
ACTAATCGGGATGCAGAAAAACACGATGGTCATAAACGTGTAGCGAGTGAGACTTCAGTA
ATGGCTACACTGAATTTGTTACAAGGGAAGAACAATGTTGGAATTAGTATGAGCAATGAA
AGGGCAGAAGCACTAGAGTCATTACTTGAATTTTGTGCAGAGTTACTTAAGCATGATAAG
ATAGAGGAATTAGCTGGTGTGCTAAAACCATTTGGAGAAGAAGCTGTTTCTTCTAGAGAA
ACTGCAATTTGGTTGACAAAAGGATTAATGAATCTTCAAAACCAAGGTGAGGAAACTGAG
AGTGCATAG

Peptide Sequence

PEP ID

XP_016495392.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase Nek6-like [Nicotiana tabacum]
Sequence

MEVRNNNEVEYSKMEDYEVIEQIGRGAFGAAFLVHHKFEKRKYVMKKIRLAKQTEKFKRT
AHQEMNLIAKLDNPYIVEYKDAWVEKDSFVCIVTSYCEGGDMTEIIRKARGTIFPEEKLC
KWLTQLLLALDYLHSNRVLHRDLKCSNIFLTKDDEIRLGDFGLAKLLNKDDLASSIVGTP
TYMCPELLADIPYGYKSDIWSLGCCMFEIAAHMPAFRAPDMTGLINKINRSTVSPLPTMY
SSTLKRLIKSMLRKSPEHRPTAAELLRHPHLQPYLAKCRNLPPAFVSVVSDKEAKHTNES
ISKPTLRKDQRLPKEIRQAKKQDKIVAVEELHELKGEAPNTCKIKKINLQSKKVENPENE
RRQSISVKKSGSTNSRSSTRSTLTDQHEGDTKEFVAEVYNTTEGNAGTDQEKHKPTDHRP
IEGKKDAKSQPEEQNKCTLKKPGIPKPYNEVAAKAIDHLSTNRDAEKHDGHKRVASETSV
MATLNLLQGKNNVGISMSNERAEALESLLEFCAELLKHDKIEELAGVLKPFGEEAVSSRE
TAIWLTKGLMNLQNQGEETESA

Transcript Sequence

Gene sequence data has not been registered.